![]() |
|
|
Vol. 26, Issue 12, 1190-1193, December 1998
Department of Biological Chemistry, Medical School, The University of Michigan
| |
Abstract |
|---|
|
|
|---|
A hypervalent iron-oxene species has been widely proposed as the "active oxygen" in cytochrome P450 (P450)-catalyzed reactions. We recently examined the effect of mutation of the highly conserved threonine residue in P450s 2B4 and 2E1 to alanine, a change that is believed to interfere with proton delivery to the active site, and have determined the change in rates of deformylation of aldehydes, epoxidation of olefins, and hydroxylation of various substrates. The results support the concept that three distinct oxidants are functional in P450 catalysis: nucleophilic peroxo-iron, nucleophilic or electrophilic hydroperoxo-iron, and electrophilic oxenoid-iron. The occurrence of multiple oxidizing species may contribute to the remarkable versatility of the P450 family of isozymes in the modification of drugs and other substrates. Furthermore, the relative concentrations of these oxidants in a particular P450 isozyme may contribute to substrate specificity and govern the type of reaction catalyzed.
| |
Introduction |
|---|
|
|
|---|
As
is now widely known, cytochrome P450
(P450)2 is unmatched among biological catalysts in its
versatility (Coon et al., 1996
). Recent progress in many
laboratories has revealed the occurrence, across different species, of
numerous P450 isoforms that catalyze a multitude of reactions. The
number of organic compounds that serve as substrates was cautiously
estimated in the 1980s to be in the hundreds or even the thousands, but
currently no one familiar with the field is surprised at the prediction
of a million or more. These include physiologically occurring compounds
such as fatty acids, steroids, eicosanoids, lipid hydroperoxides,
retinoids, and amino acids. Equally unexpected is the very large list
of xenobiotic substrates, including drugs (with many new ones being produced each year by the pharmaceutical industry), procarcinogens, antioxidants, solvents, anesthetics, dyes, pesticides, petroleum products, alcohols, and, among plant products that are foreign to
animals, flavorants and odorants. "Billions and billions," the
widely quoted expression used by Carl Sagan (1997) to indicate a very
large number related to the cosmos, may far exceed the number of
potential P450 substrates. However, it emphasizes the ability of this
catalyst to metabolize a multitude of organic compounds that can now be
produced readily by combinatorial techniques but do not occur naturally
on this planet.
Drug metabolism is a particularly interesting example of P450 action, with many compounds undergoing oxidative inactivation and others being activated or, in some unfortunate cases, yielding products that are toxic, teratogenic, or carcinogenic. Much remains to be learned about the factors responsible for the very broad substrate specificity of microsomal P450s toward some drugs and, in other cases, for the remarkably narrow positional and stereochemical specificity. The detailed structure, which is as yet unknown for the mammalian P450 isoforms, undoubtedly contributes to substrate selectivity, and in this article we present evidence for the occurrence of multiple species of "activated oxygen" and propose that they may determine the type of reaction catalyzed.
A hypervalent iron-oxene species is widely considered to be the oxidant
in P450-catalyzed reactions, with the protein functioning to orient the
substrate (White and Coon, 1980
; Guengerich and Macdonald, 1990
). This
concept of the oxidant has developed in part from the well-known
chemical properties of peroxidases and porphyrin model compounds
(Groves, 1986
), as well as from the need for a species capable of
insertion into unactivated carbon-hydrogen bonds (Groves et
al., 1978
; Sono et al., 1996
). However, a nucleophilic iron-peroxo species was proposed as an oxidant in the demethylation of
androgens by P450arom to give estrogens (Akhtar et
al., 1982
), and our laboratory found that purified liver
microsomal P450s bring about a comparable reaction, the oxidative
deformylation of various xenobiotic aldehydes to olefins and formate
(Vaz et al., 1991
; Roberts et al., 1991
; Vaz
et al., 1994
). An important line of evidence for the
iron-peroxo species as the oxidant was our finding that
H2O2 supports the
P450-catalyzed deformylation of cyclohexane carboxaldehyde to
cyclohexene, whereas artificial oxidants such as cumyl
hydroperoxide, iodosobenzene, and m-chloroperbenzoic acid do
not (Vaz et al., 1991
). The scheme in fig.
1 shows the activation of molecular
oxygen by P450 in the presence of NADPH and the reductase; two-electron
reduction gives peroxo-iron, which, upon protonation, yields
hydroperoxo-iron. The addition of a second proton in an irreversible
reaction then gives the oxene species and water. Alternatively, the
ferric enzyme and free H2O2
could be produced (not shown).
|
The investigations described here on the effect of site-directed
mutagenesis of mammalian P450s 2B4 and 2E1 make use of evidence from
other laboratories that the corresponding mutation in bacterial P450s
interferes with the activation of dioxygen to the oxenoid species by
disrupting proton delivery to the active site. In a report on the
crystal structure of the P450cam active site mutant T252A, Raag
et al. (1991)
discussed oxygen activation in connection with
two possible pathways for proton delivery via an internal solvent
channel between threonine-252 and glutamate-366 or via a
hydrogen-bonding network extending to the heme environment from the
surface of the cytochrome. As evidence for such a critical role for the
conserved threonine, camphor hydroxylation by P450cam (Martinis
et al., 1989
; Imai et al., 1989
) and fatty acid
hydroxylation by P450 BM-3 (Yeom et al., 1995
) were greatly
diminished by the mutation of this amino acid residue to alanine.
Furthermore, replacement of the conserved threonine of P450cam by
unnatural amino acids provided suggestive evidence for a role of the
oxygen atom of the threonine hydroxyl group in hydrogen bonding with
the water that functions as the ultimate proton donor to the peroxo
heme-iron complex (Kimata et al., 1995
).
Because the oxidative deformylation of xenobiotic aldehydes to yield
olefins and formate presumably involves the iron-peroxo intermediate as
the active oxidant, we proposed that disruption of the pathway leading
to the iron-oxene species (fig. 1) would result in the loss of
oxenoid-dependent reactions, such as hydroxylation, and enhancement of
deformylation reactions. As described below, such proved to be the case
with P450 2B4 T302A (Vaz et al., 1996
). Furthermore, an
examination of epoxidation reactions with P450 2E1 T303A revealed a
likely role for hydroperoxo-iron as an alternative electrophilic
oxidant (Vaz et al., 1998
).
| |
Results and Discussion |
|---|
|
|
|---|
Selected results from our recently published articles are
summarized in table 1. We chose to
examine the effects of mutagenesis on recombinant P450 2B4 with
terminal amino acids 2 through 27 deleted (
2B4) and recombinant P450
2E1 with residues 3 through 29 deleted (
2E1). These truncated
proteins, which retain catalytic activity, have been studied in our
laboratory for other reasons, including membrane-targeting. Replacement
of threonine-302 by alanine in
2B4 caused decreased formation of
formaldehyde from benzphetamine (ninefold), cyclohexanol from
cyclohexane (fourfold), and acetophenone from 1-phenylethanol
(twofold). In sharp contrast, the deformylation of cyclohexane
carboxaldehyde by the mutant was increased approximately tenfold. On
the basis of these findings and our previous evidence that
P450-dependent aldehyde deformylation is supported by added
H2O2, but not by artificial
oxidants (Vaz et al., 1991
), we concluded that the
iron-peroxy species is the direct oxygen donor. It should be noted that
the decreased oxidation of the first three substrates cannot be
attributed to poor substrate binding, because the values for the
spectral dissociation constant (KS) were
found to be unchanged in the mutant protein. Another line of evidence
for distinct oxidants is based on the metabolism of aldehydes by P450
with the concomitant inactivation of the enzyme, apparently due to heme
adduct formation (Raner et al., 1996
). In the deformylation
pathway, which is enhanced with the T302A mutation of
2B4, the rate
of enzyme inactivation is also increased. In contrast, in the pathway
leading to carboxylic acid formation, as with
trans-4-hydroxy-2-nonenal (a toxic product of membrane lipid
peroxidation), the mutant protein is less effective in inactivation
(Kuo et al., 1997
).
|
More recently, we have turned our attention to olefin epoxidation with
the T302A and T303A mutants of 2B4 and 2E1, respectively, and have
obtained evidence pointing to hydroperoxo-iron as an electrophilic
oxidant (Vaz et al., 1998
). Although we have studied model
compounds that are particularly useful for mechanistic studies, it
should be noted that our conclusions about oxidant species are
pertinent to the metabolism of drugs as well as many other classes of
P450 substrates. Epoxidation is a widespread reaction of these
catalysts. As indicated by the following examples, formation of an
epoxide has been implicated in the conversion of arachidonic acid to a
vasoactive metabolite (Carroll et al., 1987
), of
benzo[a]pyrene to the ultimately carcinogenic
diol-epoxide (Yang et al., 1976
; Deutsch et al.,
1978
), and of urethane and vinyl carbonate to a carcinogenic product
(Dahl et al., 1978
; Guengerich and Kim, 1991
); and in the
metabolism of furosemide, leading to hepatotoxicity (Mitchell et
al., 1976
), as well as in that of phenytoin (Martz et
al., 1977
) and thalidomide (Gordon et al., 1981
), which
are associated with teratogenicity. In our own investigation,
some substrates were selected because of their easily quantifiable products and, in other instances, for the availability of the cis and trans isomers or the ability to assess
both hydroxylation and epoxidation reactions.
As shown in the table, styrene epoxidation, cyclohexene epoxidation and
hydroxylation to give 1-cyclohexene-3-ol, and cis- or
trans-butene epoxidation (without isomerization) and
hydroxylation to yield 2-butene-1-ol were all significantly decreased
by the 2B4 T302A mutation. As indicated above, reduced proton transfer in this mutant protein is believed to interfere with generation of the
oxenoid species. With the T303A mutant of
2E1, however, quite
different results were obtained: namely, enhanced epoxidation of all of
the olefinic substrates and decreased allylic hydroxylation of
cyclohexene and butene. Such results suggest that two different species
with electrophilic properties, hydroperoxo-iron
(FeO2H)2+ and oxenoid-iron
(FeO)3+, can bring about the epoxidation of olefins.
The allylic carbon-hydrogen bond and the olefinic bond, representing
distinct reaction centers, are within a 3-Å spherical radius in
cyclohexene and in the isomers of 2-butene. Presumably, as an
explanation of the results obtained, the small size and symmetric
nature of these molecules obviate consideration of steric constraints
within the P450 active site. The scheme in fig.
2 indicates the kinetic results expected
with a single oxidant or with multiple oxidants. When a substrate gives
two or more oxidation products, such as P1 and
P2, and a common oxidant is involved, the rates
of formation are given as shown, and the ratio of product formation,
for example
P1/
P2 is
equal to the ratio of the rate constants,
k1/k2. If a
mutation were to perturb only proton delivery, the concentration of the
active complex and the absolute rates of product formation could
change, but the ratio of the rate constants and of products formed
would remain constant. However, if two products
for example,
P2 and P3
are formed by
the action of two different oxidants, then the ratio of the products
would be dependent on the concentration of each oxidant. In this case,
if a mutation were to alter the steady-state concentration of the
reactive complexes, the ratio of products would be expected to change.
Examination of the data in the table indicates that the threonine
mutation in
2B4 caused no change in the ratio of epoxide to allyl
alcohol formed from cyclohexene, but the corresponding mutation in
2E1 resulted in an increase in the ratio from 1.0 to 2.4, which is consistent with the involvement of different oxidants in formation of
the two products. Similar results were obtained with cis-
and trans-butene, with the mutation of
2E1 resulting in
an increase in the epoxide to allyl alcohol ratio from 90 to 460 and
from 4.0 to 5.6, respectively.
|
As shown in fig. 3, we propose that three
discrete oxidants
peroxo-iron, hydroperoxo-iron, and
oxenoid-iron
contribute to the versatility of P450 in the oxidation of
various substrates. The structures of these species are indicated as
well as the expected nucleophilic and/or electrophilic properties and
typical reactions effected. A summary of reactions that we consider
likely to utilize the hydroperoxo-iron species as an alternative
electrophilic oxidant in P450 catalysis is given in table
2. These include some examples that are
documented in the article presented here, such as epoxidation, and
others that are now under investigation. The criterion we have used for
inclusion in this list is enhanced activity with P450
2E1 when
Thr-303 in this isozyme is replaced by alanine.
|
|
Since much remains to be learned about the three-dimensional structure of the mammalian P450s we are studying, a note of caution is in order. The possibility should be considered that a structural change attributable to the threonine mutation is somehow responsible for different rates of epoxidation and hydroxylation of the same substrate. Although various control experiments argue against this possibility, it cannot be entirely ruled out. Another possible explanation is that the rate-limiting steps in epoxidation and hydroxylation are somehow affected differently by the mutation.
In summary, our results suggest that the hydroperoxo complex of P450 is capable of the epoxidation of unactivated olefinic bonds, and we propose that the versatility in oxidative reactions may depend, at least in part, on the ability to utilize as multiple oxidants the peroxo-iron, hydroperoxo-iron, and oxenoid species, depending on the substrate and type of reaction catalyzed. This could add to the scope of reactions catalyzed by the P450 family of isozymes, and, for a particular isozyme, could contribute to substrate specificity and even determine the type of reaction that occurs.
| |
Footnotes |
|---|
1 This article is dedicated to Anthony Lu for his pioneering contributions to the field of cytochrome P450 and its relevance to drug metabolism and design, and for his friendship.
This research was supported by grants DK-10339 and AA-06221 from the National Institutes of Health.
Send reprint requests to: Dr. Minor J. Coon, Department of Biological Chemistry, Medical School, The University of Michigan, Ann Arbor, MI 48109-0606. e-mail: mjcoon{at}umich.edu
| |
Abbreviations |
|---|
Abbreviation used is: P450, cytochrome P450.
| |
References |
|---|
|
|
|---|
This article has been cited by other articles:
![]() |
T. S. Dowers and J. P. Jones KINETIC ISOTOPE EFFECTS IMPLICATE A SINGLE OXIDANT FOR CYTOCHROME P450-MEDIATED O-DEALKYLATION, N-OXYGENATION, AND AROMATIC HYDROXYLATION OF 6-METHOXYQUINOLINE Drug Metab. Dispos., August 1, 2006; 34(8): 1288 - 1290. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. D. Porter JUD COON: 35 YEARS OF P450 RESEARCH, A SYNOPSIS OF P450 HISTORY Drug Metab. Dispos., January 1, 2004; 32(1): 1 - 6. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. F. Johnson THE 2002 BERNARD B. BRODIE AWARD LECTURE: Deciphering Substrate Recognition by Drug-Metabolizing Cytochromes P450 Drug Metab. Dispos., December 1, 2003; 31(12): 1532 - 1540. [Full Text] [PDF] |
||||
![]() |
E. E. Scott, Y. A. He, M. R. Wester, M. A. White, C. C. Chin, J. R. Halpert, E. F. Johnson, and C. D. Stout From The Cover: An open conformation of mammalian cytochrome P450 2B4 at 1.6-A resolution PNAS, November 11, 2003; 100(23): 13196 - 13201. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. J. Coon Enzyme Ingenuity in Biological Oxidations: a Trail Leading to Cytochrome P450 J. Biol. Chem., August 9, 2002; 277(32): 28351 - 28363. [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||